Package: SynDI 0.1.0

Michael Kleinsasser

SynDI: Synthetic Data Integration

Regression inference for multiple populations by integrating summary-level data using stacked imputations. Gu, T., Taylor, J.M.G. and Mukherjee, B. (2021) A synthetic data integration framework to leverage external summary-level information from heterogeneous populations <arxiv:2106.06835>.

Authors:Tian Gu [aut], Jeremy M.G. Taylor [aut], Bhramar Mukherjee [aut], Michael Kleinsasser [cre]

SynDI_0.1.0.tar.gz
SynDI_0.1.0.zip(r-4.7)SynDI_0.1.0.zip(r-4.6)SynDI_0.1.0.zip(r-4.5)
SynDI_0.1.0.tgz(r-4.6-any)SynDI_0.1.0.tgz(r-4.5-any)
SynDI_0.1.0.tar.gz(r-4.7-any)SynDI_0.1.0.tar.gz(r-4.6-any)
SynDI_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
SynDI/json (API)

# Install 'SynDI' in R:

install.packages('SynDI', repos = c('https://umich-biostatistics.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/umich-biostatistics/syndi/issues

Datasets:

create_synthetic_example - Example data for Create.Synthetic
initial_estimates_example - Example data for Initial.estimates

On CRAN:

4.30 score 2 stars 7 scripts 193 downloads 6 exports 75 dependencies

Last updated from:3a08bf51ea. Checks:7 NOTE, 2 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	NOTE	134
source / vignettes	OK	225
linux-release-x86_64	NOTE	139
macos-release-arm64	NOTE	129
macos-oldrel-arm64	NOTE	138
windows-devel	NOTE	88
windows-release	NOTE	81
windows-oldrel	NOTE	80
wasm-release	OK	117

Exports:%>%Create.Synthetic expit Initial.estimates Resample.gamma.binaryY Resample.gamma.continuousY

Dependencies:abind arm backports bit bit64 boot broom cli clipr coda codetools cpp11 crayon dplyr evaluate forcats foreach generics glmnet glue haven highr hms iterators jomo knitr lattice lifecycle lme4 magrittr MASS Matrix mice minqa mitml mvtnorm nlme nloptr nnet numDeriv ordinal pan pillar pkgconfig prettyunits progress purrr R6 randomForest rbibutils Rcpp RcppEigen Rdpack readr reformulas rlang rpart sandwich shape StackImpute stringi stringr survival tibble tidyr tidyselect tzdb ucminf utf8 vctrs vroom withr xfun yaml zoo

SynDI Example 1: Binary Response

Tian Gu

Rendered fromSynDI-example-binary.Rmdusingknitr::knitron May 17 2026.

Last update: 2021-07-20
Started: 2021-07-14

SynDI Example 2: Continuous Response

Tian Gu

Rendered fromSynDI-example-continuous.Rmdusingknitr::knitron May 17 2026.

Last update: 2021-07-20
Started: 2021-07-15

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Example data for Create.Synthetic()	create_synthetic_example
Create the synthetic data	Create.Synthetic
Expit function	expit
Example data for Initial.estimates()	initial_estimates_example
Internal estimation	Initial.estimates
Resample for bootstrap variance for binary Y	Resample.gamma.binaryY
Resample for bootstrap variance continuous Y	Resample.gamma.continuousY